Gene

pcid2

ID
ZDB-GENE-041114-79
Name
PCI domain containing 2
Symbol
pcid2 Nomenclature History
Previous Names
  • fa11f03
  • ik:tdsubc_1e10 (1)
  • im:6909928 (1)
  • tdsubc_1e10
  • wu:fa11f03 (1)
  • xx:tdsubc_1e10
  • zgc:101845
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have RNA binding activity and double-stranded DNA binding activity. Predicted to be involved in RNA metabolic process; poly(A)+ mRNA export from nucleus; and posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery. Predicted to colocalize with transcriptionally active chromatin. Orthologous to human PCID2 (PCI domain containing 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pcid2 Human Ortholog
No data available
Associated With pcid2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000717 Proteasome component (PCI) domain
Family IPR045114 Csn12 family
Homologous_superfamily IPR036388 Winged helix-like DNA-binding domain superfamily
Domain Details Per Protein
Protein Length Csn12 family Proteasome component (PCI) domain Winged helix-like DNA-binding domain superfamily
UniProtKB:F1QPP5 399
UniProtKB:Q5U3P0 399
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pcid2-201 (1) Ensembl 1,644 nt
mRNA pcid2-207 (1) Ensembl 1,200 nt
ncRNA pcid2-002 (1) Ensembl 940 nt
ncRNA pcid2-003 (1) Ensembl 417 nt
ncRNA pcid2-004 (1) Ensembl 660 nt
ncRNA pcid2-005 (1) Ensembl 283 nt
ncRNA pcid2-006 (1) Ensembl 276 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations